Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQLKVENLTKTYGEKSLFENISLTITEGERIGLIGVNGTGKSTLLQIISGSESGDKGTVTKAKDYTIGYLAQDPAF--NEEDTVLAAVFDGDTAALRAMRKYEEV-LLAMSLDAENTKLHDAYTAASQEMDASAAWDMNTEAKTILERLGITDLTAKISALSGGQRKRVGLAQVLIETPDLLILDEPTNHLDFQSIRWLEEYLNRFKG---AVLLVTHDRYFLDRVTN--HMVELDRGSAYRYVGNYEKFMESKAIRMENEVRESEKNKNLYRKELAWMRRGPQGRATKQNAR----QDRFHDLEKKVKIKTDDSELAIDFVTSRLGKDVFELKNLEKRFDEKQVLQDFSLIIQPGERLGITGNNGTGKSTLLNMLAGKLAPDAGEVVTGQTVQIGYYTQQNEEMDPDMRMIAYLQEAGEQVTTSGGEVISVSAMLERF----LFPP----NSHGKKIGSLSGGEKRRLFLLRILMERPNVLLLDEPTNDLDT-QTLTV---LEDYLESFNGTVITVSHDRYFLDKVVNKLLVFRAIGEVEIFYGEYSDYLKELEAKGKPAKSMKKMANTSVEKSSPEKKEKVKLTYQEQLEWDGIEDAISKLEKDIESLNETLEQTGADFTKAAEISGFITAKETELEQMMERWEFLSQYAE |
| 3J15 Chain:B ((81-531)) | ------EDCVHRYGVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVIR------AFRGNELQNYFERLKNGE---IRPVVKPQYVDLLPKAVKGKVREL----LKKVDEVGKFEEVVKELELENVLDR--------ELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVV-------YGEPGVYGIFSKPKGTR--NGINEFL-----------------QGYLKDENVRFRPYEIRFTKLSERVDV---ERETLVEY--PRLVKDYGSFK-LEVEPGE----------IRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLTVA---YKPQ------------YIKAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVF----------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51643 for 3352 contacts (-15.4/contact) +
2D Compatibility (PS) -45124 + (NN) -13008 + (LL) 15660
1D Compatibility (HY) -30400 + (ID) 6800
Total energy: -131315.0 ( -39.18 by residue)
QMean score : 0.218
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