Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTPSMEDYIEKIYSLIETKGYARVSDIADELFVHPSSVTKMVQKLDKDEYLIYEKYRGLILTPKGTQMGKRLLERHALLESFLSIIGVDPSHIYHDVEGIEHHLSWNSIDRIGDVVQFFENHPDALKTLKAMETTKPETKE
2F5F Chain:A ((4-134))
---PSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQ--------
General information:
TITO was launched using:
RESULT:
Template:
2F5F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71079 for 867 contacts (-82.0/contact) +
2D Compatibility (PS) -13391 + (NN) 2173 + (LL) 472
1D Compatibility (HY) -18400 + (ID) 4950
Total energy: -105175.0 ( -121.31 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_2F5F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F5F-query.scw
PDB file :
Tito_Scwrl_2F5F.pdb
: