Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNILDSLWNSMALFLSALFFHGMALRSIREKKPAWFQIKFANEFINYALGIYYGLLGVYFIIRGLPGTDSGIYTDMLLNILIVLHLFSSAGPATIALLLIVSGKLFLGDALFANLIYVFLIIGFHFVCMEVAKLRLSSVQKVVLVKLSAIPLMLFYLHQKIHLAYTMNDLPVWILYFLVSFFITFIIVSAAYYIDTSNKLIYDLQQSTILDPLTGLTNFRHFENAFDAAFNHATLKKSNLSVIIIDIDYFKRVNDTYGHLVGNGVLSTFSQMLLKISFPPNTVISRIGGEEFAIILPNINVSETEHLAEKIRRKVEKIDVPIVASGSVITISAGIANYDG--RNYPSANELLNAADQALYNAKRNGRNQVHIRETEPVI |
3IGN Chain:A ((8-166)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SMTDRLTGLLNRGTWENLVDAEYERFRRYGQATSLVMFDIDHFKPVNDTYGHLAGDEVIR-HTADVTRNNIRQSDSAGRYGGEEFGIILPETDAESARVICERIREAIEKSTVSTSAGDIQYTVSMGIAQLTETPENYM---QWMQKADEALYKAKESGRNKV--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111502 for 1222 contacts (-91.2/contact) +
2D Compatibility (PS) -17328 + (NN) -10957 + (LL) 20336
1D Compatibility (HY) -8000 + (ID) 3050
Total energy: -130501.0 ( -106.79 by residue)
QMean score : 0.562
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