Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LFELVNSYIDSLALFLAILFIQGMSFRKIRQYRPNWFQNGSRRLFLSILLGVYYGLAGIYFIYEGAYENNPVIYTNMRILILMVTSVFGGRIPLIFAYLVMLFGRISFDIASPTTSRYVILMTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVNNFDEGRILRGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPNMRFFTQQFGWIFTKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQFSSILKNRTFPPRTMFARIGGEEFAVLLQNVGTEQAALIADFFREEVERAKFPYNPASGKVTVSIGVASASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE |
3IGN Chain:A ((5-168)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKLSMTDRLTGLLNRGTWENLVDAEYERFRRYGQATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVTRNNIRQSDSA-GRYGGEEFGIILPETDAESARVICERIREAIEKSTVSTSAGDIQYTVSMGIAQLTETPENYMQWMQKADEALYKAKESGRNKVVV------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102216 for 1291 contacts (-79.2/contact) +
2D Compatibility (PS) -18000 + (NN) -9901 + (LL) 19768
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -121749.0 ( -94.31 by residue)
QMean score : 0.488
|
|
|