Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSPKVAALQANSNVETEIYPDGWASSLRKEVTNFYQLEEEELIFTAGVDELIELLTRVLLDTTKNTVM-ATPTFVQYRQNALIEGAEVREIPLLTDGAHDLEGMLNAIDEKTTIVWICNPNNPTGNYIDLADIQAFLDKVPSDILVVLDEAYIEYVTPQPKKHEKLIRTYKNLIITRTFSKIYGLASARVGYGIADKEIINQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRISNANGIKQYEAFAKRFEQV----KLYPANGNFVLIDLGIEARTIFSYLEKNGYITR-SGAALGFPTAVRITIGKEEENSAVIALLEKLL |
| 1IJI Chain:A ((11-351)) | ---RENVRNLTPYQSARR-------LGGNGDVWLNANEYPTAVEFQLTQQTLNR------YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEF-CPQASLAGWLAE-YPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIV-AMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASS-AVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDAL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159485 for 2803 contacts (-56.9/contact) +
2D Compatibility (PS) -36940 + (NN) -18279 + (LL) 3036
1D Compatibility (HY) -22400 + (ID) 4950
Total energy: -239018.0 ( -85.27 by residue)
QMean score : 0.521
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