Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPEITVRAKSKTYPVYINEFALEDIREKWTKSLAKFSHVFVLTDGHVAELHKAKLDAVLADLPVVTYYVAPNGEEAKTFRVYEDVMTKMIETG--LDRKAVLIAFGGGVIGDLGGFVAATYMRGIPFYQVPTTVLAH-DSAVGGKVAINHPLGKNMIGNFYQPEAVIYDTQFFATLPERELRSGFAEMIKHALISDLTLLRALMDTFTEPKDFYTKDLTPFLQR--GIEI------------KANIVAQDETEQGVRAYLNFGHTFGHALEAYGNFGKWLHGEAITYGMIYALTMSETI-----------------YGLDFDLAEFKTWLEQLGYDTTFDASVPFSKILENMRHDKKTTFNEISMVLLEEIGKPVIFKADDDLIFETYKRVMRKGGNVI
1DQS Chain:A ((61-374))-----------------------------------------------------KRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRR-------RFEGTEEILKARILASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAILT-PQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVD------QLMFNMALDKKNDGPKKKIVLLSAIGTP-------------------------


General information:
TITO was launched using:
RESULT:

Template: 1DQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84297 for 2083 contacts (-40.5/contact) +
2D Compatibility (PS) -29271 + (NN) -8242 + (LL) 7428
1D Compatibility (HY) -18800 + (ID) 5700
Total energy: -138882.0 ( -66.67 by residue)
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_1DQS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DQS-query.scw
PDB file : Tito_Scwrl_1DQS.pdb: