Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKICIAIDGPAAAGKSTVAKIVAKKLRFVYIDTGAMYRAVTYIALKNNIAYEDEKAIAALLQKTVIRF--EPGEVQQVFVGSENVTEVIRSIEVTNHVSIVAAHPSIREALQERQQVFATEGGIVMDGRDIGTAVLPNAELKIFLLASVEERAERRYKENMAKGFTGDLDQLKKEIEERDHLDYTRTHSPLKKADDAIEVDTTSMSIDQVANKILSLAELKINN
1KDO Chain:A ((8-224))------ITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEG-EDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKL--


General information:
TITO was launched using:
RESULT:

Template: 1KDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122876 for 1729 contacts (-71.1/contact) +
2D Compatibility (PS) -23643 + (NN) -12070 + (LL) 460
1D Compatibility (HY) -13200 + (ID) 4650
Total energy: -175979.0 ( -101.78 by residue)
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_1KDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KDO-query.scw
PDB file : Tito_Scwrl_1KDO.pdb: