Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VTFERLGTMNVNAEGHLEIGGVDTLKLADKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELFTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHA--SASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPEKVAE-ETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLSL |
2QGH Chain:A ((26-414)) | -------------------------ELFQTHKTPFYLYDFDKIKQAFLNYKEAFK--GRKSLICYALKANSNLSILSLLAHLESGADCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVG-----EKEALEMFLWAKKSAFLEPVSVHFHIGSQLLDLEPIIEASQKVA-KIAKSLIALGIDLRFFDVGGGIGVSYENE-ETIKLYDYAQGILNALQ------GLDLT-IICEPGRSIVAESGELITQVLYEKK--NKR-FVIVDAGMNDFLRPSLYHAKH-AIRVITPS---EISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPKLLELALED-KIRVIRKREALEDL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290308 for 3319 contacts (-87.5/contact) +
2D Compatibility (PS) -41705 + (NN) -20796 + (LL) 2668
1D Compatibility (HY) -27200 + (ID) 6900
Total energy: -384241.0 ( -115.77 by residue)
QMean score : 0.547
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