Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LPNEVYDVTIIGGGPIGLFSAFYSGLRSMKTKIIDA----EPAVGGKVRYFFPEKIIRDIGGIP-AITGENLVANLKQQAETFHPTIVCSERVVDVTKLADGTFQLTSHNGSIHFSKTIVIATGSGTFEVN-KLEALHAEDFPFAIHYDVKNIEQFRDKVVVVSGGGNSAIDWAQTLEPIAKKVHLIYRGEDFKAHEE-SVRELKNSRVEIHIHHEISELIGTNNQLTEITVCCNQTQTTKTIETEALF--INHGVKVD-LGTMAEWGFKQADFGIVVDDEMKTTVPGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG |
| 4CCQ Chain:A ((2-312)) | --SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLT---TTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTII--TETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQV----KTADDGYILTEGPKTSVDGVFACGDVCDRVYRQAIVAAG--SGCMAALSCEKWLQ------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CCQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142183 for 2575 contacts (-55.2/contact) +
2D Compatibility (PS) -32108 + (NN) -9258 + (LL) 1996
1D Compatibility (HY) -16000 + (ID) 4550
Total energy: -202103.0 ( -78.49 by residue)
QMean score : 0.457
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