Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VNILHIEWKTRIKSLVVWAVVVIVILGVFMAFFPSMQSSGMQDLVNTKMNALPQDMMKILHMDSMADLTNIDAYFAYVFQYIFIAACVYAALIGAQALIKEETDGTIEFLYAQPITRSSLVFWKMIGNLLSFVAFWVITFLASVALVLFLKPSGVDGGNLVMELVRVFSSELLVAAVFMSAGFMVSSVLRSAKQASPVALALVFLTYILGIMAGLNDKVDFFKYFSPINYAIPSEIMDKGITGTNALISCGVIVVMVAMTFVLYKKKDLKV |
1WAZ Chain:A ((60-66)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YAIQRKR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WAZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 883 for 18 contacts (49.1/contact) +
2D Compatibility (PS) -609 + (NN) 1190 + (LL) 25028
1D Compatibility (HY) 0 + (ID) 50
Total energy: 26442.0 ( 1469.00 by residue)
QMean score : 0.275
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