Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKVYYEDAVKNNALEGKTVAVIGYGSQGHAHSQNLRDNGNNVIIGIRE------GKSAESARNDGFDVYSVSEAADKADVIMILLPDETQGETYENEIKPNLKAGNSLVFAHGFNIHFDVINPPSDVDVFLVAPKGPGHLVRRTFVEGGAVPSLFAIYQDATGNARDTALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGATHLIQAGFETLVEAGYQPELAYFEVLHEMKLIVDLMYEGGMEKMRHSISNTAEYGDYVSGPRVVTADTKKAMKEVLTDIQNGNFAKSFINDNKNGFKEFHRMRKEQQGHQIEKVGAELREMMPFVKPQH |
4XDY Chain:A ((2-328)) | --EILHDEDVDDSILRDKTIAVMGYGAQGDAQANCLKDSGINVVIGETEILGGNKNPSWEKAKEDGFEVLPIDKAAEKGDVVHILLPDEVQPAIYENQIKPQLKAGKALCFSHGFNICFKRIVPPEDVDVIMVAPKAPGTEERKAYLEGFGVPGLVAVKQNPSGEAREVALAMTKAMHWTKAGILECTFEQETYEDLFGEQCVLCGGLVELMRNGFEVLVEAGYPPEMAYFECVHEMKLIVDLVWQGGIKRMAEVISNTAEYGMWAVGHQIIGPEVKEKMKEALKRVENGEFANEWVDEYKRGIPFLKASREKMGEHQVETVGAEIRKL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118298 for 2523 contacts (-46.9/contact) +
2D Compatibility (PS) -34927 + (NN) -8792 + (LL) 740
1D Compatibility (HY) -32000 + (ID) 8000
Total energy: -201277.0 ( -79.78 by residue)
QMean score : 0.443
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