Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLSNKFKSFFFLDEEEEYYEEEVAREPEPMQKKTKKEKPNKNRFY-----AVEEDDAKVVSMQGAQFSSRMVLAEPRVYAEAQELADYLKEYKSVVVNLQRISHDQATRIVDFLSGTVYALGGDIQRVGNNIFLCTPDNVEVDGSISEMLDEQNFM |
1XYQ Chain:A ((141-224)) | ----------FGSDYEDRYYRENMYRYPNQVYYRPVDQYSNQNSFVHDCVNITVKQHTVTTTTKGENFTETDVKMIERV-VEQMCITQYQKEYEA-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22903 for 452 contacts (50.7/contact) +
2D Compatibility (PS) -8316 + (NN) -2471 + (LL) 4568
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: 14034.0 ( 31.05 by residue)
QMean score : 0.225
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