Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVAISGGGTGGHVYPALALIRELKKSHPEAEFLYIGTEKGLEAGIVKREGIPFEAIEITGFKRSLSLENIKTVMRFLSGAKKSKQILRDFKPDVVIGTGGYVCGPVVYAAAKLKIPTLIHEQNSVAGLTNKFLSRYTDKVAICFEEVSDSFASEKIVFTGNPRASEVVGVDSEGALEAYGLVS--GKPTVLVFGGSRGARGVNEAVEAVLPEWNNRDFQLLYVTGDVHYEKIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELTALGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEA-----KLNSMKLSAKQMGRPDAAAKLVEAVLSIMK |
1NLM Chain:B ((8-355)) | -RLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWL--GTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAF---PGAFPNAEVV--GNPVRTDVLALP----LPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGSQQSVEQAYAEAGQPQH-KVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQH-KDRQQYWNALPLEKAGAAKIIEQPQL-------SVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160447 for 3090 contacts (-51.9/contact) +
2D Compatibility (PS) -37169 + (NN) -13749 + (LL) 2120
1D Compatibility (HY) -22800 + (ID) 5850
Total energy: -237895.0 ( -76.99 by residue)
QMean score : 0.566
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