Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVNMKQLLEVAKENKFAVGAFNVADSNFLRVVVEEAEKNNAPAIIAVHPTELDFTKDDFFQYVL--ARIKNSPVPFVLHLDHGDNMGDVMRAVRCGFSSVMIDGSLLPFEENIRVTKEVVDVCHKLGVSVEGELGTIGKTGNSIEGGVSEIIYTKPEEAEEYISRTGVDTLAVAIGTAHGIYPKDKEPKLRL--DILKEIKALVNIPLVLHG---------------GSANPDA------EIAAAVEIGIQKVNISSDYKYAFYKKCREI-LSTTELWDANAIYPDCIDAAKEVVKYKMGLFESIGQVEKYQQAKTTAWRSELI |
| 2ISV Chain:A ((3-311)) | -LCTLRQMLGEARKHKYGVGAFNVNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELG-----------------LTEPQDAKKFVELTGVDALAVAIGTSHGA---------RLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSAGHAGDYK------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ISV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168602 for 2238 contacts (-75.3/contact) +
2D Compatibility (PS) -28911 + (NN) -13368 + (LL) 2264
1D Compatibility (HY) -21200 + (ID) 5200
Total energy: -235017.0 ( -105.01 by residue)
QMean score : 0.556
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