Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLTEMLQIKYPILQGAMAQIATYELASAVSNAGGLGIIASGGMSADALREQIRLCKEKTTKPFAVNIMLMMPNC--------------------------------------PELVDVIIEEDVRVVTTGAGTP-KPFMEKFKAAGIKVIAVIPSVKIAQKMEEIGVDAVVAEGTEAGGHVG---------ETTTMALVRQVVSAVNIPVIAAGGIADGHGMAAVYALGASGVQIGTLFLVAEECPVPASFKQAVLDATDTSTTVTGRRNGAPVRSIKNPMIQKYVELENENASRDKLEELTLGSLRKAVHEGDVENGSVMAGQICGMLTEIRSTSDIIENLMKESKQVASNLVIQ |
| 4Q4K Chain:A ((5-285)) | --FTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMF-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185557 for 2002 contacts (-92.7/contact) +
2D Compatibility (PS) -25501 + (NN) -11896 + (LL) 5764
1D Compatibility (HY) -12000 + (ID) 4650
Total energy: -233840.0 ( -116.80 by residue)
QMean score : 0.575
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