Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYKQFYTYDENGDYLETILVFEDEKGLINQPKNSTNIEPSIIENGIARAMYYPSWDGSIWKEDKKRWESENPIIPAEKTEIEKLREELLLTQEALAALFESNLG |
2J5N Chain:A ((37-63)) | ---------------------------------------------------HYPLYIGGEWVDTKERMVSLNPSAPSE--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2803 for 87 contacts (32.2/contact) +
2D Compatibility (PS) -2703 + (NN) -382 + (LL) 5828
1D Compatibility (HY) 0 + (ID) 550
Total energy: 4996.0 ( 57.43 by residue)
QMean score : 0.375
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