Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVDFQNKTSAIKEK------VVGDVLSNAKVYFMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY |
3VV5 Chain:A ((38-256)) | ------------------------------------IRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERL-GLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTNPHYCTGGV---IVSRKGGPRTAKDLQGKVV---GVQVGTTYMEAAQKIPGIKEVRTY--QRDPDALQDLLAGRIDTWITDRFVA-----KEAIKERKLENTLQVGELVFQERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWFGED------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79142 for 1787 contacts (-44.3/contact) +
2D Compatibility (PS) -23128 + (NN) -7230 + (LL) 3876
1D Compatibility (HY) -14000 + (ID) 3200
Total energy: -122824.0 ( -68.73 by residue)
QMean score : 0.548
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