Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDMVKNEWKKLFKNKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDKPVDYNGQTMDVGDQLVTKLKSNKELDWNFLSKEEAEQGLKDGKYYMIVTIPKDFSKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAADGSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDKLNAGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGINQAYTGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDGNLTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLTFIKSNANFDAEAIKSKINATAGVSAEDKQKIIDAIQADLDKETQKSATQVATVEQLQSGLSGLDLA-----AIQTQVTELQTGVA-----------KISAGYQAVHGGTNEAFNSIHQAING--SGSQTLLGGANQLTAGLKSAQA--------GSAKLVAGTNQ------LNSQVPTLTSGVGQLAAGSASMENGLSKLNDGGNKLA----SNSGALRSGATELQGGTNQLAAKVPTLAGGVNQLQAGSNQLAGGLNQLSANSPKLVSGVGQLADGSSKIADGSSKLANGSFQLGDGLTKLTDGSTELTDKLADGAQQVKDTKATDKTFNMIAAPTKLAHNEYTHVSNYGHALAPYVLSLALYVGALVFNFIMPIRRVSMEGQPAYKWWLSKLSLGFVAAVAMALLEGGIMIALGLRPDSIVEFFGTAIITALAYMFLIMLLAMTFDNPGRFIAMVLLIVQLAGSGGTFPMPLTGWFFNLIHPFLPMTYSIYAFRESLAAGMGPNVYSMSMLILTIIMVACVGLLYLSMSHLKKRHDAHESALDDNQKLMALEN |
4UT1 Chain:A ((423-633)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVLPTRGALDGFSLATANGSAIAAASPVLAAGVATNSGTGVISQGSVSAGYQLPSGTTTLAYNAASKTLSGFPVGTTVTIAGTPPTSINITSATTPVPYDPSKGASMTISSTTQPAPSGVMNGVSVSLS---GTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTTTLTGA---YAGYVNAIGNAASQLKASSAAQTALVGQIT-QAQQSVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 36375 for 926 contacts (39.3/contact) +
2D Compatibility (PS) -17501 + (NN) 5188 + (LL) 45476
1D Compatibility (HY) -4400 + (ID) 2750
Total energy: 62388.0 ( 67.37 by residue)
QMean score : 0.026
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