Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSQFDEVIPRIGTNSEKWDGAEELFGRKDIIPMWVADMDFRAPKPVLDAFQRQIDHGIFGYST-KSKALVEAVIDWNKEQHQFEIDPSTLFFNGAVVPTISLAIRSLTNEGDAVLMVSPIYPPFFNVTKATERKVVMSPLIYENRQYRMDFNDLEKRMKEENVKLFLLCNPQNPGGRCFTKEELVELAKLCEKYQIPIVSDEIHADLVMKNHKHVPMMVAAPFYQDQIITLMAATKTFNLAAIKASYYIITNKDYQTRFAAEQKYATTNGL---NVFGIVGTEAAYRHGAPWLKELKEYIYSNYEYVKAELEKEVPEVGVTDLEATYLMWLDCRALPKDEKTIYTDLIEA-GVGVQMGSGFGHSGKGFVRFNIACPKETLEKSVKLLIQGLKK |
| 1D2F Chain:A ((30-387)) | -----------------------------LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA---RGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALK--GRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251545 for 2952 contacts (-85.2/contact) +
2D Compatibility (PS) -37825 + (NN) -13632 + (LL) 1796
1D Compatibility (HY) -32800 + (ID) 5850
Total energy: -339856.0 ( -115.13 by residue)
QMean score : 0.566
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