Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENF--VTHSKNGY-YDGLIFHRVIPEFMIQGGD-PDGRGTGGESIWGESFEDEFSTEAFNLRGALSMANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK
1XO7 Chain:A ((20-165))
-----------------------GRVVIGLFGNDVPKTVENFKQLASGENGFGYKGSIFHRVIRNFMIQGGDFTNFDGTGGKSIYGTRFDDE-NLKIKHFVGAVSMANAGPNSNGSQFFVTTAP---------------------------TPWLDGRHVVFGKVVEGMDVVKKVENTKTGLNDKPKKAVKINDCGV-
General information:
TITO was launched using:
RESULT:
Template:
1XO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51219 for 1052 contacts (-48.7/contact) +
2D Compatibility (PS) -15257 + (NN) -9489 + (LL) 3764
1D Compatibility (HY) -13200 + (ID) 4050
Total energy: -89451.0 ( -85.03 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_1XO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XO7-query.scw
PDB file :
Tito_Scwrl_1XO7.pdb
: