Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIQIALSIGLLLYSISTFLYLYRILKGPTTSDKVVALDSIGMNLVAIVALLSMFYDTHAFLDVILLIALLAFIGTVSFAKFIEKGKVIDRERDN
3SOK Chain:A ((3-24))
------------------------------------------------------------LIELMIVVAIIGILAAFAIPAY-------------
General information:
TITO was launched using:
RESULT:
Template:
3SOK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7084 for 81 contacts (-87.5/contact) +
2D Compatibility (PS) -2281 + (NN) -2225 + (LL) 6512
1D Compatibility (HY) -5600 + (ID) 50
Total energy: -10728.0 ( -132.44 by residue)
QMean score : 0.138
(partial model without unconserved sides chains):
PDB file :
Tito_3SOK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SOK-query.scw
PDB file :
Tito_Scwrl_3SOK.pdb
: