Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENDSLCGGHILQEGLHVRFARMHIWAVTRYTSNGRMGMRIFDRWWMDFGGG
1KXL Chain:A ((44-70))
----------------------FISFVFSDFTKNDIVQNYLYDRYLIDY---
General information:
TITO was launched using:
RESULT:
Template:
1KXL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92 for 80 contacts (-1.1/contact) +
2D Compatibility (PS) -2791 + (NN) 73 + (LL) 864
1D Compatibility (HY) -3600 + (ID) 250
Total energy: -5796.0 ( -72.45 by residue)
QMean score : -0.477
(partial model without unconserved sides chains):
PDB file :
Tito_1KXL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KXL-query.scw
PDB file :
Tito_Scwrl_1KXL.pdb
: