Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKDLLYTEEHEWVKADDGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEKVLD
2KA7 Chain:A ((6-118))
--------YTKTHEWVSIEDKVATVGITNHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISDEGELEDLLDEQAYQ----
General information:
TITO was launched using:
RESULT:
Template:
2KA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38594 for 874 contacts (-44.2/contact) +
2D Compatibility (PS) -11747 + (NN) -3200 + (LL) 912
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -66329.0 ( -75.89 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_2KA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KA7-query.scw
PDB file :
Tito_Scwrl_2KA7.pdb
: