Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRRTRKCSLVFILGILIFSCLSGFGTNVFAMDGEYHSPYGDDDLYTVQPTERSPRDPKAGEDVILNITTWPIENGQDVWVEWTKNGVAQENVTAAYDYNSGNNTYWKADLGKFEKGDEITYTTKGSTNGGTAYESGPFTFYVTDWEYVQDVTSVVDNGDSITLNMTATAGDFSPKLYLSFEDLDTLRMELSPTGKETGHAGKSGYTVEDTAEKVTVTTEDLSIEIQKSPYRMEVHQADGTLLTSEYTTANSLGWLTDGKNVINQYQNNFMTPSDEAFYGFGERYDTINQRGKDVETYVYNEYQDQAQTERTYLAVPFFVSANKYGMYVNSDFHSQFQMASKVEDKYSFVLDNDGDMTNMLDYYVISGKDQNDIVNNYTDITGKTTLLPKWAFGLWMSANEWDRESDVSSALSNAKANDIPATGFVLEQWSDEETYYIWNNATYTAKKNGEAFSYDDFTFNGKWTDPKGMVDSVHDAGMNIVLWQVPVLKDDGTVYEQRDNDEEYMISQGYSADDGTGAPYRVPASQWFGNGILL----DFTNKDAVDWWTSQREYLLTEVGIDGFKTDGGEMVWGRDTTFSNGE---------KGQEMRNRYPTDYVSSYFDFAKSINPEAVSF--SRSGTSGAQKSG-IYWSGDQTSTFDSFQASLKAGLSASTSGVSYWAWDMAGFT-------------GDYPTA---------ELYKRATAMAAFAPIMQFHSEKSDPSPSEERSPWNAVARTGDE--TILPTFQKYLYTRMNLLPYIYTAAKDTADNGKSMMRQMAMDYPEDVNARDLDEQYMFGDDLLVAPIVQEGQTEKEVYLPEG-EWVDIWNGGVHPGGETISYYADVDTLPVFAKAGAIIPMNMTDGYQLGQNVGNDLKSYDNLTFRVYPSGDSEYSFYDD------VNGGEMRDISVSEDFANEKVSV-----DLPAMADETTMQV-FSTEPTSVTIDGADVAKADTLDAFNEATTGYYYDTVQNLTYVKAAAKDAKQAIVLNGVNHAPYEAEFGHLTNVTTASDHAGYTGTGFVAGFDAEKEAVEFDIDAVDGASDYTMEVRYSAGVEDATRTVYINGKKQQITLPKTANWDTWNTVEVPVTLQAGNNQVVFDFEADDTAGINFDHVVIKK |
2XVG Chain:A ((403-962)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDYYFVAGDTKDDIISGYRQLTGKSVMLPKWAYGFWQSRERYKSSDEIIQNLKEYRDRKIPIDNIVLD-WS------YWPEDAWGSHDFDKQF----------FPDPKALVDKVHAMNAQIMISVWPKFYPTTDNYKEL-NAKGFMFNRNLDEKN----------LDWIGKGYLNAFYDPFSPEATAIFWKQIRDKINVH-GFDAWWLDAVEPDIHSNLTFEKRKWLMTPNARGNGAEIFNAYAVPHAEGVYQGELATDGDKRSFILTRSGFGGIQRTGSAIWSGDIVSRWSDMKDQIAAGIGTNLAGVTNWTFDIGGFTPEDRFRHGKKGFVGSWTALDAEQVDEWQELNTRWYQFGAFVPLYRSHGQ----------NPYREIFNIADEGTEVYNAMVWYTKLRYYLMPYIYTLGGDTYHKDGTIMRGLVMDFPNDRKAWDINTQYMFGPAFLVNPVYEYKARSRDVYLPAGSDWYNFYTGEKLAGGQTITADAPLARVPLFVKAGAIVPTG-----PLIQHVDEGLNS--PLLITVYTGANGSFDIYEDDGRSLKYQQGEWSRIPLSYDDVTGTLIIGDRVGSFTGMADERNIRVRFIAGPTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113709 for 4236 contacts (-26.8/contact) +
2D Compatibility (PS) -53415 + (NN) -11268 + (LL) 30288
1D Compatibility (HY) -43200 + (ID) 7900
Total energy: -199204.0 ( -47.03 by residue)
QMean score : 0.467
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