Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVIFIEVMKERFGEFEGETVWKWTMINDHDMRMSVLNYGAIVTSLETKDKFGDFANISLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNEGSNHRHGGKFNFSKKLWDVSVEKSLDQIVMTFEYCWADGENGYPGKIDAKMTYTLNNKNEWLVDYEARSNQPTIYNPSNHIYFNLSGEAGSTVLQHQLWVNSDSFLPI-DEEFLPIGEKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHTFILKHENGRPDAVLFDPKSGR------RLEMETKADSVLIYTANSLDGSFEIDERAVPKYAGITMETQGLVDAINHEGFGDIVLRPEKPFTSRTAFRFTVES
1MMY Chain:A ((16-336))----------------------SLTNKAGVTISFTNLGARIVDWQK-----DGKHLILGFDSAKEYLEKDAYPGATVGPTAGRIKDGLVKISGKDYILNQNEGPQTLHGGEESIHTKLWTYEVTDLGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAISDKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLV-KGIDHPFLL-------DQLGLDKEQARLTLDDTSISVFTDQPSIVIFTANFGDLGTLYHEKKQVHHGGITFECQVSPGSEQIPELGDISLKAGEKYQATTIYSL----


General information:
TITO was launched using:
RESULT:

Template: 1MMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117884 for 2694 contacts (-43.8/contact) +
2D Compatibility (PS) -33567 + (NN) -7986 + (LL) 2436
1D Compatibility (HY) -18400 + (ID) 5250
Total energy: -180651.0 ( -67.06 by residue)
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_1MMY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MMY-query.scw
PDB file : Tito_Scwrl_1MMY.pdb: