Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKVYSDKNAKVEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRK--HKTKVNRKFRDKGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGKYGLIETN
1N3G Chain:A ((1-96))
-MTMNITSKQMEITPAIRQHVADRLAKLEKW--QTHLINPHIILS-KEPQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARR-----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1N3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43104 for 650 contacts (-66.3/contact) +
2D Compatibility (PS) -10037 + (NN) -539 + (LL) 4852
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -55678.0 ( -85.66 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_1N3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N3G-query.scw
PDB file :
Tito_Scwrl_1N3G.pdb
: