Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIRVPATTANLGPGFDSCGLALTL-YLTLDIGAEADSWYIEHNIGGGIPHDETNVIIETALNLAPNLTPHHLVMTCDIPPARGLGSSSAAVVAGIELA-----------------NTLAELNLSKEEKVRIAAEIE------GHPDNVAPAVLGNWVVGAKLDGEDFYVRHLFPDCAL--IAFIPKAELLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMTLAGEMMERDLWHEKYRSQLVPHLAQIRDVAKNQGAYAACLSGAGPTVLVFAPRNLANKLQTSLQTLEIDADVLLLDVEGSGAEVFR |
| 1H73 Chain:A ((3-278)) | VRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDKEII-------IEVDDKNIPTDPDKNVAGIVAKK---MIDDFNIGKGV---KITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNY--EPLEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFKIKEEVKDK-VYGITISGSGPSIIAFPKEEFIDEVENILR---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1H73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -132960 for 1930 contacts (-68.9/contact) +
2D Compatibility (PS) -27024 + (NN) -9761 + (LL) 1288
1D Compatibility (HY) -17200 + (ID) 3900
Total energy: -189557.0 ( -98.22 by residue)
QMean score : 0.341
|
|
|