Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKVGIFPSMIILFTVGISAVLYPLLPSEVAVHFGTDFSPDMFMQKWLGLILIPFLMIMFTGTEYYGKEKVNQESLLEFEYCFRLLLVLLTIIQMSIIVYALGYDIPTGRFSLVTAGAFMFVVAAYIQYSKKLFKFLTMIGFKKIDAWSRNLLRKITTVTLNIAGTICFILALFMRNDPSYLMLAMLMTMCVIVVGSGVYLNKK |
1BC4 Chain:A ((99-109)) | ----------------------------QYPVHFAGIGR--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19 for 22 contacts (0.9/contact) +
2D Compatibility (PS) -1086 + (NN) 188 + (LL) 18392
1D Compatibility (HY) -800 + (ID) 150
Total energy: 16563.0 ( 752.86 by residue)
QMean score : -0.493
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