Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFAGNNEVVNPERFNEINKEIKRQLGMFTALNGNVRASLVGLLMANNNASRESVQQVIANYNTLIQAGFQRTEYTYFAAYLLLESENPTKTAQKAKTIHQLFKKDHPFLTKSEDVTTAVFLANLPEENTTELAEVTEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDSKFIRRVDNIVEELRQKGIKVKPIHYSSIGILAFVMDGRKIDSGLVNLIDELQQQPGLRFGREFVTALAISLYTEKQSGQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS |
| 3L2C Chain:A ((29-66)) | ------------------------------------------------------------------------------------------------------------------YAELISQAIESAP---EKRLTLAQIYEWMVRTVPYFKDKGD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3345 for 198 contacts (-16.9/contact) +
2D Compatibility (PS) -4089 + (NN) -4161 + (LL) 23244
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 9849.0 ( 49.74 by residue)
QMean score : 0.387
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