Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVSKVAIASDHGGIELRKSIISYLESVGISYEEF-----GPETPESVDYPRLAITVSEKVVNQEVDRGILVCGTGIGMSIAANKVKGIRCALVGDTFSAHATREHNDTNVLALGARVIGPGLAEDIVKIWLETEYEG-GRHANRVGQITAYEDSHA
3K7O Chain:A ((4-152))
----RVAIGTDHPAFAIHENLILYVKEAG---DEFVPVYCGPKTAESVDYPDFASRVAEMVARKEVEFGVLACGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERTTGVEVIREIIITFLQTPFSGEERHVRRIEKIRAIEASH-
General information:
TITO was launched using:
RESULT:
Template:
3K7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102563 for 1166 contacts (-88.0/contact) +
2D Compatibility (PS) -15301 + (NN) -4614 + (LL) 836
1D Compatibility (HY) -12000 + (ID) 3300
Total energy: -136942.0 ( -117.45 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3K7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K7O-query.scw
PDB file :
Tito_Scwrl_3K7O.pdb
: