Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIMLVCSAGMSTSLLVTKMEKAAEAQGIEAKIFAVAEAEAANHLDEIDVLLLGPQVRFLEGNMKKKLEPKGIPLAVINSVDYGMMKGDKVLEQALELMK
3KAP Chain:A ((2-62))
-KVLILFGSSTGNTESIAQKLEELVAAGGHEVTLLNAAEASADNLADGYDAVLMGCSAWGME---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KAP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32038 for 359 contacts (-89.2/contact) +
2D Compatibility (PS) -6508 + (NN) 82 + (LL) 2856
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -37758.0 ( -105.18 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_3KAP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KAP-query.scw
PDB file :
Tito_Scwrl_3KAP.pdb
: