Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLIFAIVQDQDSNRLSDALTKGNFGATKLATTGGFLKAGNTTFIIGTEDERVEDALAIIKENCKAREQMMTPSASLGVTVDTYVPYPIEVQVGGATVFVMPVESFHHF
3M05 Chain:A ((7-114))
-KLVIAIVQDKDANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLEIIKKASHTREEFMTP-------------YPIKVQVGGATVLVLPVDQFERF
General information:
TITO was launched using:
RESULT:
Template:
3M05.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49421 for 613 contacts (-80.6/contact) +
2D Compatibility (PS) -10602 + (NN) -4899 + (LL) 824
1D Compatibility (HY) -12000 + (ID) 2950
Total energy: -79048.0 ( -128.95 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_3M05.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M05-query.scw
PDB file :
Tito_Scwrl_3M05.pdb
: