Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFLKELESNLTVSKLMELCFEHPNYKDYCSVISTKKGEVLESLSPAGTKVYFVLSGIYGMIVEEDAEMEEESCKECIVRFLQKGDSFGLYHLFYDEWSPHVSMQSLGHGEVMEVDSNFLFSIFDKKDENN----FFMIKVMAEE--LREAHTFAKLSFLKKEERIRKAILKCAQTLGTFS-DNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNRPKPLLVMDKTRL
3IWZ Chain:A ((27-226))
----------------IERFLAHSHRRRYPT-----RTDVFRPGDPAGT-LYYVISGSVSIIAEEDDD------RELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSHPQGTQL--RVSRQELARLVGCSREMAGRVLKKLQADGLLHARGKTVVL------
General information:
TITO was launched using:
RESULT:
Template:
3IWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90581 for 1359 contacts (-66.7/contact) +
2D Compatibility (PS) -21054 + (NN) -11724 + (LL) 3244
1D Compatibility (HY) -12800 + (ID) 2300
Total energy: -135215.0 ( -99.50 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_3IWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IWZ-query.scw
PDB file :
Tito_Scwrl_3IWZ.pdb
: