Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNELEDKILAILEQHQVGVLTSVQGD-----YPHARYMTFLHDG-LTLYTPSGKELPKTDEVRRNPHVSVLIGYESP-GSAFLEINGLASLEEDESIKERIWENISKEWF-RGEDSPSFVVIKIVPEQIRILNSDDDGPDTLDLIG
2I02 Chain:A ((8-137))
-RTQEIQKLHELIKNIDYGMFTTVDDDGSLHSYPMSKSGD---EATLWFFTYAGSH--KVTEIEH--HEQVNVSFSSPEQQRYVSISGTSQLVKDRNKMRELWKPELQTWFPKGLDEPDIALLKVNINQVNYWDS------------
General information:
TITO was launched using:
RESULT:
Template:
2I02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35614 for 797 contacts (-44.7/contact) +
2D Compatibility (PS) -13510 + (NN) -8375 + (LL) 120
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -66479.0 ( -83.41 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_2I02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I02-query.scw
PDB file :
Tito_Scwrl_2I02.pdb
: