Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITIVKGDITEQEVDVIVNAANSGLLGGGGVDGAIHQAAGPDLLKECQEVINRIGSCPAGEAVITSAGDLKATYIIHAVGPIWKDGEHQEA-NKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCFDEENLKLYNKLINSEVV
4UML Chain:A ((56-220))
-KVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPDL----KEDLQKLKGCRTGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGYPLEDATHIALRTVRRFLEIHGET-IEKVVFAVSDLEE-GTYQKLL-----
General information:
TITO was launched using:
RESULT:
Template:
4UML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126126 for 1372 contacts (-91.9/contact) +
2D Compatibility (PS) -18138 + (NN) -12742 + (LL) 1136
1D Compatibility (HY) -11200 + (ID) 2900
Total energy: -169970.0 ( -123.88 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_4UML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UML-query.scw
PDB file :
Tito_Scwrl_4UML.pdb
: