Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYGEEQQEIIVYEMSEKILAEQKKGITARKLFNLTPTEYVVSLDVKAATVEQNTDKWWLVLDGGLLVLGAMMLISGISAYFQKNAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTIKYLLVAVGVIAVWMFVMTIVQVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIPSL |
3PIV Chain:A ((115-150)) | ---------------------RIKRHFRTLKKILKKKQYSAEAWEQIRRVVKSHLQR------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3284 for 167 contacts (-19.7/contact) +
2D Compatibility (PS) -4056 + (NN) -2367 + (LL) 16200
1D Compatibility (HY) 0 + (ID) 350
Total energy: 6143.0 ( 36.78 by residue)
QMean score : 0.309
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