Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VIHSTLGGITKRMAKIIFVKDEQNEFQAYDFLQNLIVEEPLMATLVFQGLLQIETAETRKLSTGKQILPDVHLIIGKSQAYSLQTTRVETTVDQPIQEMKAHFKDKNCRLIYFTAFSGDETYYCFVKGYFKDKNPFTDQMSSYREEVKRVFLRRIEAETSIGNADYQFETLKNKALENEGIAHYLESFSASLGKYIFSK-RMEKKWSQLDLALKSDLSPVIIGRLEAGDPDLTLRMYQKVCTVLGVKATFSVD |
3S8Q Chain:A ((5-65)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29810 for 395 contacts (-75.5/contact) +
2D Compatibility (PS) -6481 + (NN) -3883 + (LL) 15256
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -31568.0 ( -79.92 by residue)
QMean score : 0.439
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