Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLDRVTLEDIEVNLKAEDWREAIQMSARLLLERGAIKESYIDGMIQSVENNGPYIVIAKHIALAHTRPEFGVIHGGLTFATLADGVAFGSDMFDPVKLIITLAATD--SESHLEVLSELAEVLMDEEKVTRLIEANSSQAFYDELTKEG
4GQX Chain:A ((20-145))
-----LPLENVVIDLSVTSKKRVFEQAGLIFENQNGIARSTVTDNLFARERLG-STGLGEGVAIPHGRIK-GLKHPLAAFVRLAEPIPFEAPDGQPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERL-----------------
General information:
TITO was launched using:
RESULT:
Template:
4GQX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89113 for 937 contacts (-95.1/contact) +
2D Compatibility (PS) -13075 + (NN) -2371 + (LL) 1632
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: -110927.0 ( -118.39 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_4GQX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GQX-query.scw
PDB file :
Tito_Scwrl_4GQX.pdb
: