Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIIFAKEDDLE-EIISSHPKILLNFWAEWCAPCRCFWPTLEQFAEMEEGNVQVVKINVDKQRALAQKFDVKGIPNSLVLVDGEIKGAIAGIVSCDELRSRFKSLAK
2TRX Chain:A ((4-100))
--IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLK--------
General information:
TITO was launched using:
RESULT:
Template:
2TRX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70144 for 665 contacts (-105.5/contact) +
2D Compatibility (PS) -9987 + (NN) 1189 + (LL) 976
1D Compatibility (HY) -8400 + (ID) 1600
Total energy: -87966.0 ( -132.28 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_2TRX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2TRX-query.scw
PDB file :
Tito_Scwrl_2TRX.pdb
: