Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEMDPNTDLSSVTRPRATPVLTTFQFDSGKVGHIWTTFSEDQIDLNFACPEVLYKMIDVLMFYLEEGAEYVRLDAVGFMWKVPGTSSIHLEETHEIVKLFRDLVDIAAPGTIIITETNVPHVDNISYFGNGEKEAHMVYQFPLPPLVLHAIHHGNAKFLRN-WAKNLELPEGKRTFFNFLASHDGIGLNPVRGIIPEAEILALVNDLEEEGALVSYKQNP-DGSKS---PYEINVTYMD--------ALSKQADTDDLRLARFLVAHAVLMSIPGVPAVYVQSILGSRND---YLGVEATSHNRSINRKKYDLAEITAELEQRGSLRKATYDALTKLISTRKAESLFHPEIPMEVLESTAELFVVKRSSDAESIILIHNLSEKE---VSYSLDSGVYT--NLYKGSTVTGSDSIKLSGYEFCWLKTKNYREEQK |
| 1G5A Chain:A ((239-626)) | ------------------------QLEDGRW--VWTTFNSFQWDLNYSNPWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFKSEAIV-HPDQVVQY-IGQDECQIGYNPLQMALLWNTLATREVNLLHQALTYRHNLPE-HTAWVNYVRSHDDIGWT----FADEDAAYLGISGYDHRQFLNRFFVNRFDGSFARGVPFQYNPSTGDCRVSGTAAALVGLAQDDPHAVDRIKLLYSIALSTGGLPLIYLGDEVGTLNDDDWSQDSNKSDDSRWAHRPRYNEA-LYAQRNDPSTAAGQIYQDLRHMIAVRQSNPRFDGGRLVTFNTNNKHIIGYIRNN---ALLAFGNFSEYPQTVTAHTLQAMPFKAHDLIGGKTVSLNQDLTLQPYQVMWLE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161893 for 2730 contacts (-59.3/contact) +
2D Compatibility (PS) -39264 + (NN) -12163 + (LL) 1532
1D Compatibility (HY) -22000 + (ID) 4700
Total energy: -238488.0 ( -87.36 by residue)
QMean score : 0.390
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