Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHFRIGLSVSKKIGNAVCRNRIKRYIRQSFHELESQINPENEYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNNSK |
4XKY Chain:A ((223-284)) | ----YNAAKNADMEEVRRLQEKVMQISATIYTVGQHGSSYLK-GLKCALSL-LGICSD----YVAAPFHKFE----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9701 for 324 contacts (29.9/contact) +
2D Compatibility (PS) -6140 + (NN) 1333 + (LL) 4216
1D Compatibility (HY) -5200 + (ID) 900
Total energy: 3010.0 ( 9.29 by residue)
QMean score : 0.118
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