Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIAIDAMGGDYAPKAIVEGVNQAISDFSDIEVQLYGDQKKIEKYLTVT----ERVSIIHTEEKINSD-------------DEPAKAVRRKKQSSMVLGAKAVKDGVAQAFISAG--NTGALLAAGLFVVGRIKGVDRPGLMSTMPTLDGVGFDMLDLGANAENTASHLHQYAILGSFYAKNVRGIEVPRVGLLNNGTEET---KGDSLHKEAYELLAA-EPSINFIGNIEARDL--------------MSSVADVVVT-DGFTGNAVLKTMEGTAMSIMGSLKSSIKSGGVKAKLGALLLKDSLYQLKDSMDYSSAGGAVLFGLKAPIVKCHGSSDSKAVYSTLKQVRTMLETQVVDQLVDAFTDE |
| 1TD9 Chain:A ((29-328)) | ---------EGL-DE-RILEAVSKLAGN-KVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGMEDLVQAFVERRKGKATEEQA-RKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG-EEQYVFADCAINIAPDSQDLAEIAIESANTAK-MFDI-EPRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTLDGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQ-------------------------------------RLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124089 for 2164 contacts (-57.3/contact) +
2D Compatibility (PS) -28058 + (NN) -9611 + (LL) 4988
1D Compatibility (HY) -7600 + (ID) 2500
Total energy: -166870.0 ( -77.11 by residue)
QMean score : 0.443
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