Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLDD--YIAYRDTLTKVEETLSDIDKEKF-EKLISGERFAGKKQFIRDIQPFFNAFKAD
2C5I Chain:T ((9-88))
--------------------------------------------------------------------------------QQVVKDTKEQLNRINNYITRHNTAGDDDQEEEIQDILKDVEETIVDLDRSIIVMKRDENEDVSGREAQVKNIKQQLDALKLR
General information:
TITO was launched using:
RESULT:
Template:
2C5I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7643 for 408 contacts (-18.7/contact) +
2D Compatibility (PS) -7811 + (NN) 1429 + (LL) 6916
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -10109.0 ( -24.78 by residue)
QMean score : 0.384
(partial model without unconserved sides chains):
PDB file :
Tito_2C5I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C5I-query.scw
PDB file :
Tito_Scwrl_2C5I.pdb
: