Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRYKAQISYDGSAFSGFQRQPNCRTVQEEIERTLKRL-----NSGNDV---IIHGAGRTDAGVHAYGQVIHFDLPQARDV-EKLRFGLDTQCPDDIDIVKVEQVSDDFHCRYDKHIKTYEFLVDIGRPKNPMMRNY--ATHYPYPVIIELMQEAIKDLV---GTHDFTGFTAS-GTSVENKVRTIFDAKIQFEASKNLLIFTFT---GNGFLYKQVRNMVGTLLKIGNGRMPISQIKTILQAKNRDLAGPTAAGNGLYLKEIIYEDKECFSNFRK |
| 4NZ7 Chain:A ((9-260)) | -------MAYSGKGYHGMQ---QFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRCARTAKGVSAAGQVVSLKVWLIDDILEKI----NSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLL----PTFAFAHKDRDVQDETYRLSAETLQQVNRLLACYKGTHNFHNFTSQKGPQDPSACRYILEMYCEEPFVREGLEFAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGTEKVDV--PKAPGLGLVLERVHFEKYNQRFGLHE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NZ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92994 for 1607 contacts (-57.9/contact) +
2D Compatibility (PS) -24816 + (NN) -9504 + (LL) 1124
1D Compatibility (HY) -14800 + (ID) 3200
Total energy: -144190.0 ( -89.73 by residue)
QMean score : 0.388
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