Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIFEKAPAKLNLGLDIKGRCDDGYHELAMIMVSIDLNDYVTISELKEDCIVIDSDSSKMPLNNDNDVFKAADIIKNQYGINKGVHIRLEKSIPVCAGLGGGSTDAAATIRALNRLWNLQMDYDEMVAIGFKIGSDVPYCLGGGCSLVLGKGEIVKPLPTLRPCWIVLVKPDFGISTKSIFRDIDCKSISRVDIDLLKSAILSSDYQLMVKSMGNSLEDITITKNPVISTIKERMLNSGADVALMTGSGPTVFSMCSTEKKADRVFNSMKGFCKEVYKVRLLR |
| 1UEK Chain:A ((5-241)) | ------APAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEPVSSGL------HFQGPYGRENLAYRAASLYLEAAGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVD---LFALARTLGADVPFFLLGRGAEARGVGERLKPL-ALPPVPAVVFFPGLRVPTPLVYRAVRPEDFG---PDLPVEAILEALARGEEPPYWNSLEGPAFRLFPELKEVRGRMRALGLRGVLMSGSGSAFFGLAEGPDHARRAAEALRAWGRAWAGTLGGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128279 for 1963 contacts (-65.3/contact) +
2D Compatibility (PS) -25508 + (NN) -3027 + (LL) 1428
1D Compatibility (HY) -12800 + (ID) 4100
Total energy: -172286.0 ( -87.77 by residue)
QMean score : 0.379
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