Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDYKKYQIIYAPDVLEKLKEIRDYISQNYSSTSGQRKMEQIINDIEKLEVFPEVGFDADEKYGSEISNYHSTRGYTLSKDYIVLYHIEEEENRVVIDYLLPTRSDYMKLFK
3A75 Chain:A ((123-212))
----KGTAVGVPGTLKGLEEALDKW--------GTRSMKQLITPSIKLA---EKGFPIDSVLAEAISDYQEKLSRTAAKDVFLPNGEPLKEGDTLI------QKDLAKTFK
General information:
TITO was launched using:
RESULT:
Template:
3A75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10111 for 499 contacts (20.3/contact) +
2D Compatibility (PS) -8840 + (NN) 2846 + (LL) 824
1D Compatibility (HY) -1200 + (ID) 1450
Total energy: 2291.0 ( 4.59 by residue)
QMean score : 0.166
(partial model without unconserved sides chains):
PDB file :
Tito_3A75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A75-query.scw
PDB file :
Tito_Scwrl_3A75.pdb
: