Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIDKKEFLALIASIILLIFASVTFFLFKDHGTTQMDTVESSVNHVSDSQLTEAQDMLDKFEKKPSEKLLKDVELALNKLSNSSKKEALQKRFKKAKDKYLKDEADKKATKDATDLVEILEQAPSEENVLKAEAAVNKLTVKE--SKEALQKRIDTVKTQYGLIGNQTPSSSVAETTEQGTANPASQDTSSYVNQNVAPTYEQPQTNNTPVTPGVNNTVPTPGTGTAPATNGTGVAQ |
2GOM Chain:A ((112-160)) | --------------------------------------------------------------------------------------------------------------IQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLK------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1386 for 291 contacts (-4.8/contact) +
2D Compatibility (PS) -5162 + (NN) -4307 + (LL) 10340
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -3715.0 ( -12.77 by residue)
QMean score : 0.701
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