Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEVVVESFELDHTIVKAPYVRLIS-EEVGPVGDIITNFDIRLIQPNENAIDTAGLHTIEHLLAKLIRQRIN-----GLIDCSPFGCRTGFHMIMWGKQDATEIAKVIKSSLEAIAGGVTWEDVPGTTIESCGNYKDHSLHSAQEWAKLILSQGISDNAFERHIV
2FQO Chain:A ((4-147))
------VESFELDHNAVVAPYVRHCGVHKVGTDG-VVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRSHAEKYDHFDIIDISPMGCQTGYYLVVSGEPTSAEIVDLLEDTMKE---AVEITEIPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKEELLKVFG--
General information:
TITO was launched using:
RESULT:
Template:
2FQO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85041 for 985 contacts (-86.3/contact) +
2D Compatibility (PS) -14372 + (NN) -3541 + (LL) 944
1D Compatibility (HY) -13600 + (ID) 2800
Total energy: -118410.0 ( -120.21 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2FQO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FQO-query.scw
PDB file :
Tito_Scwrl_2FQO.pdb
: