Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLLFMGTPDFSATVLKGILADGKYDVLAVVTQPDRAVGRKKEIKMTPVKEVALENNIPVYQPEKLSGSPELEQLMTLGADGIVTAAFGQFLPTKLLE-SVGFAINVHASLLPKYRGGAPIHYAIINGEKEAGVTIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLLDTLPGYLSGDIKPIPQNEEEVSFSPNISPDEERIDWNKSSRDIFNHVRGMY-PWPVAHTLLEGNRFKLY--EVTMSEGKGSPGQVIAKTKNSLTVATGDGAIELKSVQPAGKPRMDIKDFLNGVGRNLEIGDKFGE |
| 1YRW Chain:A ((2-280)) | --KTVVFAYHDMGCLGIEALLAAG-YEISAIFTHTD---------FYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRVHP---KAQPGSVISVAP--LLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQ-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177406 for 2143 contacts (-82.8/contact) +
2D Compatibility (PS) -28722 + (NN) -9292 + (LL) 908
1D Compatibility (HY) -20000 + (ID) 4500
Total energy: -239012.0 ( -111.53 by residue)
QMean score : 0.512
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