Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKDLTKIDRDLEEAKKKVADLENEKRQAEENL---QKQIGKLYVQIQLKKDKSQSYETILDDLKTELELIKQEEKARREEAKNRQLTSSDEH
3JB9 Chain:S ((98-132))
--KQELSTALYSLDAALRVISRLTKERDEAREALAKF---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3JB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5548 for 122 contacts (45.5/contact) +
2D Compatibility (PS) -3773 + (NN) -3609 + (LL) 5072
1D Compatibility (HY) -1600 + (ID) 450
Total energy: 1188.0 ( 9.74 by residue)
QMean score : 0.806
(partial model without unconserved sides chains):
PDB file :
Tito_3JB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JB9-query.scw
PDB file :
Tito_Scwrl_3JB9.pdb
: